1 setup

Run this daily to get a snapshot of tag stats and health

2 notes

It looks like ZcTag130_DUML recently pushed a message that was corrupt but managed to still be decoded as some sort of series data but with all the wrong times. I think it is possible the decoder will catch the mistake, otherwise, we’ll have to filter it out manually.

2.1 PATH TO LATEST DATA

# paths to update when you run
portaldir <- "portal_downloads"
datadirss <- list.files(portaldir)
datadir <- file.path(portaldir, datadirss[length(datadirss)])

2.2 basic helper function

2.3 load paths adjust as needed

2.4 Import data from wildlife portal and the goniometer. Merge the two stacks.

3 tag summary

ptt hex serial tag_model deployid catalog_ID_DUML BRS_season deploydate_yyyymmdd deploytime_hhmm species location tagger permit tagtype longitude latitude tagside taglocation taglocationnotes programming_basic_descriptor notes recorder age sex agesex_conf headshot agesex_reason appearance_notes
233109 406B15F 22A0220 SPLASH10-F-333 ZcTag128_DUML BRS9_2021 20220621 1928 Zca Hatteras DLW Nowacek 22156 SPLASH10 -74.74860 35.65602 right below_dorsal Zca_BRS_series_fastloc wrc a f High 0 calf present NA
201587 1002835 19A0914 SPLASH10-333 ZcTag129_DUML Zca_Rakes_027_HAT BRS9_2021 20220621 2056 Zca Hatteras DLW Nowacek 22156 SPLASH10 -74.75484 35.64619 left dorsal Zca_BRS_series 26 days wrc a m High 1 erupted teeth NA
201588 100284C 19A0916 SPLASH10-333 ZcTag130_DUML BRS9_2021 20220630 1413 Zca Hatteras DLW Nowacek 22156 SPLASH10 -74.72370 35.64610 right dorsal Zca_BRS_series 26 days wrc a f High 0 calf present NA
220734 2C223E1 SPLASH10-333 ZcTag131_DUML BRS9_2021 20220803 1511 Zca Hatteras DLW Nowacek 22156 SPLASH10 -74.60525 35.71495 left below_dorsal Tagging 35 42.897 74 36.315 Zca_BRS_series 26 days wrc NA NA
220730 2C223AD SPLASH10-333 ZcTag132_DUML BRS9_2021 20220803 1717 Zca Hatteras DLW Nowacek 22156 SPLASH10 -74.58530 35.69462 left dorsal Tagging location 35 41.677, -74 35.118. Zca_BRS_series 26 days; cup stayed on wrc a m NA NA
220731 2C223BE SPLASH10-333 ZcTag133_DUML BRS9_2021 20220805 1320 Zca Hatteras DLW Nowacek 22156 SPLASH10 74.70610 35.63001 Zca_BRS_series 26 days; Bad photos of tagging but maybe video. Webster got pics prior to tagging. Tag133 is 6893. Better pic of zc133 with tag on second surfacing 6964 wrc NA NA
220741 2C2705F SPLASH10-333 ZcTag134_DUML BRS9_2021 20220805 1342 Zca Hatteras DLW Nowacek 22156 SPLASH10 74.70235 35.62822 Zca_BRS_series 26 days; Zc134 tagged with zc133. Video. D750 zc134 pic 7089. wrc NA NA
220739 2C27035 SPLASH10-333 ZcTag135_DUML BRS9_2021 20220805 1707 Zca Hatteras DLW Nowacek 22156 SPLASH10 74.63046 35.61973 Zca_BRS_series 26 days; Tagged zc135 on first approach; video; cup may have stayed on? wrc NA NA

4 calculate stats

5 summaries

5.1 status and corrupt

deployid ptt nmsg ncrc transmits battvoltrange zerodepthrange last_sta_recieved ncorrupt
8 ZcTag128_DUML 233109 1 1 796 3.504 to 3.504 3 to 3 2022-06-23 09:40:16 64
1 ZcTag129_DUML 201587 90 85 24545 3.376 to 3.568 -79 to 172 2022-08-29 02:08:42 243
2 ZcTag130_DUML 201588 114 109 20898 2.928 to 3.568 0 to 3 2022-08-27 09:30:29 383
5 ZcTag131_DUML 220734 11 11 1777 3.504 to 3.632 1 to 4 2022-08-09 01:07:40 176
3 ZcTag132_DUML 220730 29 29 6947 3.312 to 3.504 1 to 3 2022-08-29 09:51:48 186
4 ZcTag133_DUML 220731 45 42 5846 3.44 to 3.568 -3 to 53 2022-08-28 13:44:12 246
7 ZcTag134_DUML 220741 27 26 8512 3.504 to 3.568 -77 to 2 2022-08-27 14:09:25 283
6 ZcTag135_DUML 220739 29 27 7876 3.44 to 3.568 1 to 2 2022-08-27 16:39:35 504

5.2 locations

deployid ptt nloc nz na nb n0 n1 n2 n3 last_loc_recieved
8 ZcTag128_DUML 233109 48 0 7 27 6 2 0 0 2022-06-29 23:07:29
1 ZcTag129_DUML 201587 874 1 114 288 310 110 42 9 2022-08-29 09:48:16
2 ZcTag130_DUML 201588 792 2 69 195 340 139 40 7 2022-08-29 09:52:47
5 ZcTag131_DUML 220734 121 4 22 45 35 11 2 2 2022-08-13 02:39:57
3 ZcTag132_DUML 220730 251 1 31 87 88 30 11 3 2022-08-29 09:52:09
4 ZcTag133_DUML 220731 271 0 39 101 78 32 16 5 2022-08-29 09:52:05
7 ZcTag134_DUML 220741 238 1 39 103 70 17 6 2 2022-08-29 03:54:12
6 ZcTag135_DUML 220739 271 1 41 120 75 24 8 2 2022-08-29 02:10:06

5.3 behavior

deployid ptt n_beh_msgs totalbeh_time_hours nbehgaps behgap_time_hours latest_beh_recieved
8 ZcTag128_DUML 233109 0 0 0 0
1 ZcTag129_DUML 201587 0 0 0 0
2 ZcTag130_DUML 201588 0 0 0 0
5 ZcTag131_DUML 220734 0 0 0 0
3 ZcTag132_DUML 220730 0 0 0 0
4 ZcTag133_DUML 220731 0 0 0 0
7 ZcTag134_DUML 220741 0 0 0 0
6 ZcTag135_DUML 220739 0 0 0 0

5.4 series

this doesn’t count the messages quite right for some reason, but you get the idea. you can scroll down below and see the plot of messages receieved.

deployid ptt n_ser_msgs totalser_time_hours nsergaps sergap_time_hours nsermsggaps latest_ser_recieved
8 ZcTag128_DUML 233109 20 80 11 112 28 2022-06-29 16:00:00
1 ZcTag129_DUML 201587 151 604 0 0 0 2022-07-17
2 ZcTag130_DUML 201588 117 468 0 0 0 2022-07-20
5 ZcTag131_DUML 220734 25 100 6 40 10 2022-08-09 08:00:00
3 ZcTag132_DUML 220730 114 456 16 88 22 2022-08-26 08:00:00
4 ZcTag133_DUML 220731 93 372 16 192 48 2022-08-29
7 ZcTag134_DUML 220741 72 288 23 216 54 2022-08-26 12:00:00
6 ZcTag135_DUML 220739 39 156 13 224 56 2022-08-21 12:00:00

5.5 fastloc

deployid ptt fastloc_received fastloc_locnum fastloc_failures fastloc_latest
ZcTag129_DUML 201587 0 0 0 0
ZcTag130_DUML 201588 0 0 0 0
ZcTag132_DUML 220730 0 0 0 0
ZcTag133_DUML 220731 0 0 0 0
ZcTag131_DUML 220734 0 0 0 0
ZcTag135_DUML 220739 0 0 0 0
ZcTag134_DUML 220741 0 0 0 0
ZcTag128_DUML 233109 7 14 83 29-Jun-2022 15:41:50

6 position snapshot

Plot of the last four positions for all the tags which have generated an argos position within the last 3 days

7 plot pressure sensors

PROVISIONAL plot status cutoffs and bat voltage. Cutoffs are in dotted red lines. These are either:

  1. healthy tags: the last status messages as a conservative cutoff and on tags that are still actively transmitting this is likely to increase
  2. unhealthy pressure transducer tags: if there are 2 status messages (crc’d) where the | zerodepth | > 10 then this is the last good status message before the 1st of those two bad messages.

We have settled on a more complicated cutoff system to capture a little more very likely good data. For detail please see DATAPREP_sattag_processing. But this gives you a general idea of approx. cutoffs and pressure transducer health.

8 ship based cees

8.1 +/- 12 hour look at ship based cee 22_01 on 20220807

gonio hits in purple

9 series message source plots

10 series series

10.1 ZcTag128_DUML || 233109

10.2 ZcTag129_DUML || 201587

10.3 ZcTag130_DUML || 201588

10.4 ZcTag131_DUML || 220734

10.5 ZcTag132_DUML || 220730

10.6 ZcTag133_DUML || 220731

10.7 ZcTag134_DUML || 220741

10.8 ZcTag135_DUML || 220739

11 corrupt versus total messages {DISABLED}